USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: Q96EM0 USC-OGP 2-DE database:  Q96EM0 Q96EM0 General information about the entry View entry in simple text format Entry name Q96EM0 Primary accession number Q96EM0 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Trans-3-hydroxy-L-proline dehydratase {ECO:0000303|PubMed:22528483, ECO:0000303|PubMed:24649405}; EC=4.2.1.77 {ECO:0000269|PubMed:22528483, ECO:0000269|PubMed:24649405}; AltName: Full=Trans-L-3-hydroxyproline dehydratase;. Gene name Name=L3HYPDH Synonyms=C14orf149 Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1196: pI=6.47; Mw=40351 Cross-references UniProtKB/Swiss-Prot Q96EM0; T3HPD_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name T3HPD_HUMAN Primary accession number Q96EM0 Secondary accession number(s) Q96LJ5 Sequence was last modified on  May 18, 2010 (version 2) Annotations were last modified on  March 15, 2017 (version 102) Name and origin of the protein Description RecName: Full=Trans-3-hydroxy-L-proline dehydratase {ECO:0000303|PubMed:22528483, ECO:0000303|PubMed:24649405}; EC=4.2.1.77 {ECO:0000269|PubMed:22528483, ECO:0000269|PubMed:24649405}; AltName: Full=Trans-L-3-hydroxyproline dehydratase; Gene name Name=L3HYPDH Synonyms=C14orf149 Encoded on Name=L3HYPDH; Synonyms=C14orf149 Keywords Complete proteome; Lyase; Polymorphism; Reference proteome. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL AK058165; BAB71696.1; -; mRNA EMBL AL159140; -; NOT_ANNOTATED_CDS; Genomic_DNA EMBL BC012131; AAH12131.1; -; mRNA CCDS CCDS9739.1; -; . RefSeq NP_653182.1; NM_144581.1; . UniGene Hs.729061; -; . ProteinModelPortal Q96EM0; -; . SMR Q96EM0; -; . BioGrid 125210; 17; . STRING 9606.ENSP00000247194; -; . DrugBank DB00172; L-Proline; . iPTMnet Q96EM0; -; . PhosphoSitePlus Q96EM0; -; . BioMuta L3HYPDH; -; . DMDM 296452868; -; . EPD Q96EM0; -; . MaxQB Q96EM0; -; . PaxDb Q96EM0; -; . PeptideAtlas Q96EM0; -; . PRIDE Q96EM0; -; . Ensembl ENST00000247194; ENSP00000247194; ENSG00000126790; . GeneID 112849; -; . KEGG hsa:112849; -; . UCSC uc001xee.2; human; . CTD 112849; -; . DisGeNET 112849; -; . GeneCards L3HYPDH; -; . HGNC HGNC:20488; L3HYPDH; . HPA HPA056694; -; . MIM 614811; gene; . neXtProt NX_Q96EM0; -; . OpenTargets ENSG00000126790; -; . PharmGKB PA134961537; -; . eggNOG ENOG410IIC6; Eukaryota; . eggNOG COG3938; LUCA; . GeneTree ENSGT00390000002032; -; . HOGENOM HOG000084336; -; . HOVERGEN HBG057443; -; . InParanoid Q96EM0; -; . KO K18384; -; . OMA ARMAQWY; -; . OrthoDB EOG091G0CI6; -; . PhylomeDB Q96EM0; -; . TreeFam TF329167; -; . GenomeRNAi 112849; -; . PRO PR:Q96EM0; -; . Proteomes UP000005640; Chromosome 14; . Bgee ENSG00000126790; -; . CleanEx HS_C14orf149; -; . ExpressionAtlas Q96EM0; baseline and differential; . Genevisible Q96EM0; HS; . GO GO:0016836; F:hydro-lyase activity; IDA:UniProtKB; . GO GO:0050346; F:trans-L-3-hydroxyproline dehydratase activity; IEA:UniProtKB-EC; . GO GO:0008152; P:metabolic process; IDA:UniProtKB; . InterPro IPR008794; Pro_racemase_fam; . PANTHER PTHR33442; PTHR33442; 1; . Pfam PF05544; Pro_racemase; 1; . PIRSF PIRSF029792; Pro_racemase; 1; . SFLD SFLDS00028; Proline_Racemase; 1; .

Gateways to other related servers

• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
• World-2DPAGE Repository - A public repository for gel-based proteomics data linked to protein identification published in the literature.
• World-2DPAGE Portal - A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
• ExPASy - The resources web server of the Swiss Institute of Bioinformatics

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